Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5097

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5096: 13464 - K11292 SUPT6H, SPT6 transcription elongation factor SPT6, at 1740048 to 1744775 13464 mRNA_5097: 13465 - Hypothetical Protein, at 1745073 to 1746754 13465 mRNA_5098: 13466 - K08065 NFYB nuclear transcription Y subunit beta, at 1747637 to 1748369 13466

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,744,771 + -3.0
1,744,969 + -0.4
1,745,378 - 13465 mRNA_5097 0.18 -2.9
1,745,677 - 13465 mRNA_5097 0.36 -1.7
1,745,678 + 13465 mRNA_5097 0.36 -3.8
1,745,812 - 13465 mRNA_5097 0.44 -1.1
1,745,922 - 13465 mRNA_5097 0.50 -0.7
1,746,048 + 13465 mRNA_5097 0.58 0.0
1,746,133 + 13465 mRNA_5097 0.63 -1.8
1,746,253 + 13465 mRNA_5097 0.70 -2.6
1,746,257 + 13465 mRNA_5097 0.70 -1.0
1,746,537 + 13465 mRNA_5097 0.87 -1.6
1,746,573 - 13465 mRNA_5097 0.89 -2.9
1,746,987 - -3.0
1,746,989 - 0.1
1,746,996 + -1.6
1,747,019 + -0.9
1,747,023 + -1.8
1,747,079 - -0.8
1,747,109 + -2.5
1,747,137 - -2.9
1,747,137 - -3.3
1,747,139 + -0.9
1,747,144 + -0.8
1,747,150 - -3.3
1,747,162 - -1.8
1,747,163 - -0.6
1,747,165 + -0.8
1,747,166 - -0.2
1,747,168 + -3.6
1,747,180 + -0.5
1,747,181 + -1.6
1,747,192 - -2.0
1,747,221 - -0.3
1,747,221 + -2.1
1,747,237 + -0.6
1,747,286 - -2.2
1,747,307 + -0.5
1,747,308 - -0.8
1,747,309 + -0.3
1,747,317 + -0.2
1,747,318 + -1.8
1,747,327 - 1.6
1,747,327 - -1.4
1,747,333 - -3.4
1,747,476 - -0.9