Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5065

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5064: 13432 - K00286 proC pyrroline-5-carboxylate reductase, at 1665955 to 1667428 13432 mRNA_5065: 13433 - HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253, at 1667643 to 1669072 13433 mRNA_5066: 13434 - KOG3170 Conserved phosducin-like protein, at 1669244 to 1670342 13434

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,666,881 + 13432 mRNA_5064 0.63 -1.2
1,667,448 - -0.9
1,667,449 - -1.2
1,667,594 - -2.2
1,668,044 - 13433 mRNA_5065 0.28 -1.9
1,668,111 - 13433 mRNA_5065 0.33 -1.3
1,669,014 + -0.3
1,669,052 + -0.4
1,669,352 - 0.5
1,669,642 - 13434 mRNA_5066 0.36 0.9
1,669,907 + 13434 mRNA_5066 0.60 -3.1
1,670,056 + 13434 mRNA_5066 0.74 -0.8