Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5038

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1610939 to 1612058 13405 mRNA_5038: 13406 - Hypothetical Protein, at 1613042 to 1613500 13406 mRNA_5039: 13407 - Hypothetical Protein, at 1614263 to 1614994 13407

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,612,099 + -0.1
1,612,102 + -0.4
1,612,106 + 1.1
1,612,142 - -0.6
1,612,225 - -1.7
1,612,228 + -0.3
1,612,234 + -1.9
1,612,235 + 0.5
1,612,237 + -1.1
1,612,247 - -1.2
1,612,248 - -0.7
1,612,251 + -0.6
1,612,255 + -1.7
1,612,331 + -1.3
1,612,348 + -3.0
1,612,348 + -1.9
1,612,349 - -2.6
1,612,350 + -1.3
1,612,360 + -1.0
1,612,397 - -2.5
1,612,493 + -2.3
1,612,507 + 0.2
1,612,639 - -2.3
1,612,646 - -1.9
1,612,657 - -0.0
1,612,795 - -1.3
1,612,798 + 0.2
1,612,817 - -1.4
1,612,820 - -3.4
1,612,968 - -0.8
1,612,985 + -1.8
1,613,429 + 13406 mRNA_5038 0.84 -1.5
1,613,587 + -1.4
1,613,883 + -3.6
1,613,885 - -2.2
1,614,001 + 0.6
1,614,027 + -0.5
1,614,334 + -1.9
1,614,348 + 13407 mRNA_5039 0.12 -1.9