Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4994

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4993: 13361 - K20660 CYP709 cytochrome P450, family 709, at 1494883 to 1497041 13361 mRNA_4994: 13362 - K09568 FKBP1 FK506-binding protein 1, at 1497335 to 1498309 13362 mRNA_4995: 13363 - Hypothetical Protein, at 1498512 to 1499346 13363

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,496,964 + -3.0
1,496,965 + -1.9
1,497,086 - -3.3
1,497,114 - -4.5
1,497,123 + 0.0
1,497,126 + -0.4
1,497,214 + -1.3
1,497,394 - -0.2
1,497,518 - 13362 mRNA_4994 0.19 -0.7
1,497,522 - 13362 mRNA_4994 0.19 0.5
1,497,524 - 13362 mRNA_4994 0.19 0.6
1,497,707 + 13362 mRNA_4994 0.38 -1.0
1,497,879 - 13362 mRNA_4994 0.56 -2.6
1,498,149 + 13362 mRNA_4994 0.83 -0.4
1,498,155 + 13362 mRNA_4994 0.84 -1.5
1,498,288 + -2.3
1,498,424 - -0.4
1,498,433 + -0.6
1,498,441 - -1.0
1,498,470 + -2.9
1,498,560 - -1.0
1,498,567 - -1.3
1,498,727 - 13363 mRNA_4995 0.26 -2.5
1,499,029 + 13363 mRNA_4995 0.62 -2.1
1,499,160 + 13363 mRNA_4995 0.78 0.1