Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4977

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4977: 13345 - Hypothetical Protein, at 1459156 to 1464394 13345 mRNA_4978: 13346 - K12883 NCBP2, CBP20 nuclear cap-binding protein subunit 2, at 1465278 to 1466176 13346

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,458,358 - -0.6
1,458,391 + -3.1
1,458,825 - -2.6
1,458,826 + -1.9
1,458,968 - -0.4
1,458,993 + -1.9
1,459,670 + -2.4
1,459,801 - 13345 mRNA_4977 0.12 -2.0
1,459,856 + 13345 mRNA_4977 0.13 -0.9
1,460,090 + 13345 mRNA_4977 0.18 -1.9
1,460,310 - 13345 mRNA_4977 0.22 -2.8
1,460,706 - 13345 mRNA_4977 0.30 -0.1
1,461,400 + 13345 mRNA_4977 0.43 -0.7
1,461,733 + 13345 mRNA_4977 0.49 -2.4
1,462,023 + 13345 mRNA_4977 0.55 -2.4
1,463,071 - 13345 mRNA_4977 0.75 0.8
1,463,107 + 13345 mRNA_4977 0.75 -1.1
1,463,200 - 13345 mRNA_4977 0.77 -0.8
1,463,583 + 13345 mRNA_4977 0.85 -2.7
1,464,289 - -0.5
1,464,329 - 0.5
1,464,333 - -2.2
1,464,412 - -0.6
1,464,691 - -0.1
1,464,986 + -0.5
1,465,133 - -2.9
1,465,140 + 0.0
1,465,288 + -2.6
1,465,295 + -1.9
1,465,322 + -1.4