Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4973

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4972: 13340 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1449962 to 1451515 13340 mRNA_4973: 13341 - K18466 VPS26 vacuolar protein sorting-associated protein 26, at 1451904 to 1453549 13341 mRNA_4974: 13342 - Hypothetical Protein, at 1453896 to 1454599 13342

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,450,990 - 13340 mRNA_4972 0.66 -1.1
1,451,156 - 13340 mRNA_4972 0.77 -2.3
1,451,193 - 13340 mRNA_4972 0.79 -1.7
1,451,207 - 13340 mRNA_4972 0.80 -0.5
1,451,282 - 13340 mRNA_4972 0.85 -2.5
1,451,318 + 13340 mRNA_4972 0.87 -2.5
1,451,525 + -1.4
1,451,530 - 0.3
1,451,558 - -1.1
1,451,715 + 0.6
1,451,729 + -1.3
1,451,870 + -2.7
1,453,031 - 13341 mRNA_4973 0.68 0.2
1,453,866 - -3.3
1,454,164 + 13342 mRNA_4974 0.38 -0.2
1,454,169 + 13342 mRNA_4974 0.39 -1.3
1,454,186 + 13342 mRNA_4974 0.41 -0.9
1,454,195 - 13342 mRNA_4974 0.42 -0.7
1,454,219 - 13342 mRNA_4974 0.46 -1.5
1,454,285 + 13342 mRNA_4974 0.55 -0.9
1,454,341 - 13342 mRNA_4974 0.63 -1.5
1,454,354 - 13342 mRNA_4974 0.65 -0.0
1,454,381 - 13342 mRNA_4974 0.69 -2.1
1,454,407 + 13342 mRNA_4974 0.73 0.5
1,454,479 - 13342 mRNA_4974 0.83 -2.8
1,454,498 - 13342 mRNA_4974 0.86 -3.0
1,454,504 - 13342 mRNA_4974 0.86 -2.0
1,454,505 + 13342 mRNA_4974 0.87 -2.8
1,454,507 - 13342 mRNA_4974 0.87 -0.2
1,454,512 + 13342 mRNA_4974 0.88 0.1
1,454,522 - 13342 mRNA_4974 0.89 0.2
1,454,531 + -4.4