Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4934

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4933: 13301 - K14972 PAXIP1, PTIP PAX-interacting protein 1, at 1349859 to 1354237 13301 mRNA_4934: 13302 - K00611 OTC, argF, argI ornithine carbamoyltransferase, at 1354445 to 1355871 13302 mRNA_4935: 13303 - BLAST salivary gland secretion 1 [Moniliophthora roreri..., at 1356416 to 1359547 13303

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,353,541 - 13301 mRNA_4933 0.84 -2.2
1,353,661 + 13301 mRNA_4933 0.87 -3.2
1,354,222 - 1.0
1,354,357 + -1.3
1,354,386 - -2.1
1,354,389 - -1.0
1,354,389 - -1.3
1,354,395 + -2.1
1,354,396 + -2.1
1,354,403 - -1.7
1,354,407 - 0.7
1,354,417 - 1.7
1,354,435 - -3.1
1,354,571 + -3.0
1,354,702 - 13302 mRNA_4934 0.18 -1.9
1,354,714 + 13302 mRNA_4934 0.19 -0.9
1,355,019 + 13302 mRNA_4934 0.40 -2.1
1,355,136 + 13302 mRNA_4934 0.48 -2.1
1,355,241 - 13302 mRNA_4934 0.56 1.0
1,355,424 - 13302 mRNA_4934 0.69 -2.4
1,355,753 + 0.9
1,355,904 - -2.1
1,355,978 + 0.3
1,356,326 - -0.7
1,356,338 - -0.9
1,356,355 + -2.6