Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4866

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4865: 13233 - K12860 CDC5L, CDC5, CEF1 pre-mRNA-splicing factor CDC5/CEF1, at 1173228 to 1176152 13233 mRNA_4866: 13234 - KOG2881 Predicted membrane protein, at 1176473 to 1177592 13234 mRNA_4867: 13235 - K06634 CCNH cyclin H, at 1177691 to 1179183 13235

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,176,283 - -0.4
1,176,291 - -4.0
1,176,293 - -2.9
1,176,304 - -0.5
1,176,419 - -0.2
1,176,422 + -0.1
1,176,566 - -0.9
1,177,036 + 13234 mRNA_4866 0.50 -3.3
1,177,339 + 13234 mRNA_4866 0.77 -1.8
1,177,499 - 0.7
1,177,630 + -4.3
1,177,737 - -1.0