Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4847

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4846: 13214 - K03943 NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, at 1132189 to 1133318 13214 mRNA_4847: 13215 - Hypothetical Protein, at 1133572 to 1137413 13215 mRNA_4848: 13216 - Hypothetical Protein, at 1137464 to 1141122 13216

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,133,344 - 0.4
1,133,353 + 0.1
1,133,379 - -0.0
1,133,450 + -2.8
1,133,454 - -1.5
1,133,507 + -1.5
1,133,509 - -2.2
1,133,510 + -0.6
1,133,643 + -0.8
1,133,670 + -0.2
1,133,784 - -1.0
1,133,800 + -1.4
1,133,814 - -3.5
1,133,847 - -1.6
1,134,076 - 13215 mRNA_4847 0.13 -3.8
1,134,087 + 13215 mRNA_4847 0.13 0.1
1,134,285 - 13215 mRNA_4847 0.19 -1.9
1,134,346 + 13215 mRNA_4847 0.20 -1.2
1,134,386 - 13215 mRNA_4847 0.21 -2.1
1,134,540 + 13215 mRNA_4847 0.25 -1.8
1,134,545 - 13215 mRNA_4847 0.25 -0.1
1,134,572 - 13215 mRNA_4847 0.26 -0.7
1,134,585 - 13215 mRNA_4847 0.26 1.4
1,134,593 + 13215 mRNA_4847 0.27 -0.5
1,134,593 + 13215 mRNA_4847 0.27 -4.1
1,134,602 + 13215 mRNA_4847 0.27 -1.4
1,134,948 - 13215 mRNA_4847 0.36 -0.7
1,135,097 + 13215 mRNA_4847 0.40 -0.8
1,135,240 - 13215 mRNA_4847 0.43 -1.7
1,135,258 - 13215 mRNA_4847 0.44 -2.5
1,135,268 + 13215 mRNA_4847 0.44 -1.7
1,135,278 + 13215 mRNA_4847 0.44 -3.0
1,135,283 - 13215 mRNA_4847 0.45 -1.7
1,135,290 + 13215 mRNA_4847 0.45 -1.1
1,135,424 - 13215 mRNA_4847 0.48 -1.5
1,135,451 + 13215 mRNA_4847 0.49 0.8
1,135,478 + 13215 mRNA_4847 0.50 -1.8
1,135,568 + 13215 mRNA_4847 0.52 -0.6
1,135,584 + 13215 mRNA_4847 0.52 -1.5
1,135,593 + 13215 mRNA_4847 0.53 -2.1
1,135,739 - 13215 mRNA_4847 0.56 0.4
1,135,855 + 13215 mRNA_4847 0.59 -0.1
1,135,867 - 13215 mRNA_4847 0.60 -2.2
1,136,043 - 13215 mRNA_4847 0.64 -1.0
1,136,207 - 13215 mRNA_4847 0.69 -0.6
1,136,309 - 13215 mRNA_4847 0.71 -1.4
1,136,314 + 13215 mRNA_4847 0.71 -0.9
1,136,417 - 13215 mRNA_4847 0.74 -0.7
1,136,914 + 13215 mRNA_4847 0.87 -0.0
1,136,914 + 13215 mRNA_4847 0.87 0.0
1,136,917 + 13215 mRNA_4847 0.87 -0.3
1,137,042 - -0.4
1,137,058 + -3.1
1,137,072 - -2.0
1,137,087 + -3.4
1,137,158 + -2.4
1,137,196 - -2.9
1,137,204 + -2.7
1,137,215 + -3.1
1,137,235 + -0.7
1,137,336 - -3.6
1,137,347 - -0.4
1,137,533 + -0.0
1,137,632 - -0.7
1,137,903 - 13216 mRNA_4848 0.12 -2.5
1,137,920 - 13216 mRNA_4848 0.12 -0.3
1,137,925 + 13216 mRNA_4848 0.13 -3.4
1,138,065 - 13216 mRNA_4848 0.16 -3.7
1,138,077 + 13216 mRNA_4848 0.17 -3.2
1,138,083 - 13216 mRNA_4848 0.17 -2.2
1,138,165 + 13216 mRNA_4848 0.19 -0.7
1,138,165 - 13216 mRNA_4848 0.19 -0.7
1,138,231 + 13216 mRNA_4848 0.21 -3.0
1,138,350 + 13216 mRNA_4848 0.24 -1.6