Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4836

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4835: 13203 - KOG0490 Transcription factor, contains HOX domain, at 1114213 to 1116199 13203 mRNA_4836: 13204 - BLAST NEK protein kinase [Microbotryum lychnidis-dioicae p1..., at 1116510 to 1117726 13204 mRNA_4837: 13205 - K20872 NEK2 NIMA (never in mitosis gene a)-related kinase 2, at 1117743 to 1117911 13205

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,115,564 - 13203 mRNA_4835 0.68 -2.0
1,115,663 + 13203 mRNA_4835 0.73 0.6
1,115,922 - 13203 mRNA_4835 0.86 -0.1
1,116,036 - 0.8
1,116,679 + 13204 mRNA_4836 0.14 -1.0
1,116,922 + 13204 mRNA_4836 0.34 -1.2
1,117,150 + 13204 mRNA_4836 0.53 -3.3
1,117,689 - -1.5
1,117,998 + 0.3
1,117,998 + -0.2
1,118,302 - -2.5
1,118,602 + 1.2