Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4804

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4803: 13171 - BLAST ribosomal protein Mrp49 [Schizosaccharomyces octo..., at 1051383 to 1052079 13171 mRNA_4804: 13172 - HMMPfam-PAP2 superfamily-PF01569, at 1052365 to 1054205 13172 mRNA_4805: 13173 - ProSiteProfiles-BTB domain profile.-PS50097, at 1055118 to 1056196 13173

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,052,178 - -1.0
1,052,201 + -1.6
1,052,439 - -1.4
1,052,878 - 13172 mRNA_4804 0.28 -2.2
1,053,033 + 13172 mRNA_4804 0.36 -1.7
1,053,326 - 13172 mRNA_4804 0.52 -2.3
1,053,486 + 13172 mRNA_4804 0.61 -2.3
1,053,489 + 13172 mRNA_4804 0.61 -2.7
1,053,631 + 13172 mRNA_4804 0.69 -0.7
1,053,764 - 13172 mRNA_4804 0.76 -2.0
1,053,772 + 13172 mRNA_4804 0.76 -1.1
1,053,800 - 13172 mRNA_4804 0.78 -0.6
1,053,801 + 13172 mRNA_4804 0.78 -1.0
1,053,895 - 13172 mRNA_4804 0.83 -2.7
1,053,926 - 13172 mRNA_4804 0.85 -2.8
1,053,931 - 13172 mRNA_4804 0.85 -2.5
1,053,949 + 13172 mRNA_4804 0.86 -3.0
1,053,970 + 13172 mRNA_4804 0.87 -2.1
1,053,987 + 13172 mRNA_4804 0.88 -1.7
1,054,076 - -2.1
1,054,083 - -1.1
1,054,086 - -2.7
1,054,090 - -1.2
1,054,121 + -0.4
1,054,128 + -1.4
1,054,142 + -2.9
1,054,243 + -3.5
1,054,251 + -1.6
1,054,253 + -2.3
1,054,258 - -0.4
1,054,258 - 0.9
1,054,261 + -0.6
1,054,263 - 0.6
1,054,269 - 0.1
1,054,277 + -1.2
1,054,283 + -0.4
1,054,413 + -2.2
1,054,414 + -3.7
1,054,423 - -1.0
1,054,426 - -0.6
1,054,440 + -1.3
1,054,556 - -1.7
1,054,575 - -1.5
1,054,703 - -1.2
1,054,717 + -2.7
1,054,719 + 1.0
1,054,722 - -3.9
1,054,724 + 0.2
1,054,728 - -1.0
1,054,741 - -1.2
1,054,743 - -1.2
1,054,778 - -3.0
1,054,786 - -4.6
1,054,788 + 0.1
1,054,877 - -0.7
1,054,913 - -1.2
1,054,922 + -1.0