Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4802

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4801: 13169 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1046260 to 1047966 13169 mRNA_4802: 13170 - K09313 CUTL homeobox protein cut-like, at 1048232 to 1051035 13170 mRNA_4803: 13171 - BLAST ribosomal protein Mrp49 [Schizosaccharomyces octo..., at 1051383 to 1052079 13171

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,047,739 + 13169 mRNA_4801 0.87 -1.2
1,047,895 + -0.0
1,047,989 - -1.8
1,048,031 - -0.2
1,048,042 + -0.9
1,048,045 + -1.3
1,048,048 + 0.7
1,048,344 - -2.4
1,048,361 + -3.0
1,048,483 - -0.8
1,048,504 - -2.1
1,048,643 + 13170 mRNA_4802 0.15 -2.9
1,048,794 + 13170 mRNA_4802 0.20 -1.9
1,049,262 - 13170 mRNA_4802 0.37 -0.4
1,049,801 - 13170 mRNA_4802 0.56 -0.5
1,049,826 - 13170 mRNA_4802 0.57 -0.9
1,049,912 - 13170 mRNA_4802 0.60 -1.1
1,049,956 - 13170 mRNA_4802 0.61 -3.3
1,050,083 - 13170 mRNA_4802 0.66 -0.6
1,050,102 + 13170 mRNA_4802 0.67 -1.3
1,050,250 - 13170 mRNA_4802 0.72 -0.8
1,050,593 + 13170 mRNA_4802 0.84 0.2
1,050,649 + 13170 mRNA_4802 0.86 -0.7
1,050,861 - -2.2
1,050,974 + -1.1
1,051,109 - -1.0
1,051,125 - -2.9
1,051,153 + 0.3
1,051,286 + 0.4