Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4776

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4775: 13143 - K01724 PCBD, phhB 4a-hydroxytetrahydrobiopterin dehydratase, at 989386 to 989809 13143 mRNA_4776: 13144 - Hypothetical Protein, at 990713 to 991663 13144 mRNA_4777: 13145 - Hypothetical Protein, at 992308 to 993106 13145

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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989,745 - 13143 mRNA_4775 0.85 -4.1
989,745 + 13143 mRNA_4775 0.85 -2.4
989,750 - 13143 mRNA_4775 0.86 -0.0
989,750 - 13143 mRNA_4775 0.86 -1.7
989,801 + -3.6
990,054 - -2.6
990,057 + 0.1
990,192 + 0.9
990,224 - -1.1
990,342 - -1.5
990,352 - -3.3
990,363 - -1.5
990,372 - 0.5
990,807 - 0.7
990,819 + 13144 mRNA_4776 0.11 0.2
990,821 + 13144 mRNA_4776 0.11 0.2
990,833 + 13144 mRNA_4776 0.13 -0.6
990,940 + 13144 mRNA_4776 0.24 -3.4
990,952 + 13144 mRNA_4776 0.25 -2.8
991,265 + 13144 mRNA_4776 0.58 -2.4
991,418 - 13144 mRNA_4776 0.74 -1.1
991,445 + 13144 mRNA_4776 0.77 -1.1
991,555 - 13144 mRNA_4776 0.89 0.0
991,717 + -1.8
991,828 - -0.9
991,835 - -1.9
991,972 - -0.6
991,980 - -1.1
991,989 - -1.5
991,990 + -2.4
992,147 - -2.2
992,281 + -1.5