Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4767

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961767 to 963160 13134 mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963483 to 966203 13135 mRNA_4768: 13136 - Hypothetical Protein, at 966490 to 969299 13136

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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962,638 + 13134 mRNA_4766 0.62 -1.9
962,672 + 13134 mRNA_4766 0.65 -0.0
962,697 - 13134 mRNA_4766 0.67 1.6
962,778 + 13134 mRNA_4766 0.73 -1.7
962,798 - 13134 mRNA_4766 0.74 -2.0
963,076 - -0.1
963,338 - -2.4
963,369 - -2.1
963,735 - -0.3
963,757 + 13135 mRNA_4767 0.10 -2.6
964,145 + 13135 mRNA_4767 0.24 0.5
964,187 - 13135 mRNA_4767 0.26 -0.9
964,191 + 13135 mRNA_4767 0.26 -3.7
964,560 + 13135 mRNA_4767 0.40 -2.8
964,652 + 13135 mRNA_4767 0.43 -2.8
964,719 - 13135 mRNA_4767 0.45 -0.5
964,736 - 13135 mRNA_4767 0.46 -2.4
964,741 + 13135 mRNA_4767 0.46 -2.2
964,792 - 13135 mRNA_4767 0.48 -1.3
964,839 + 13135 mRNA_4767 0.50 -2.0
964,851 + 13135 mRNA_4767 0.50 -1.1
964,891 + 13135 mRNA_4767 0.52 -0.8
964,923 - 13135 mRNA_4767 0.53 -2.6
965,316 - 13135 mRNA_4767 0.67 -2.7
965,386 - 13135 mRNA_4767 0.70 -1.7
965,520 + 13135 mRNA_4767 0.75 0.1
965,595 - 13135 mRNA_4767 0.78 -3.1
965,611 - 13135 mRNA_4767 0.78 -2.4
965,660 + 13135 mRNA_4767 0.80 -3.3
965,667 - 13135 mRNA_4767 0.80 -2.9
965,667 + 13135 mRNA_4767 0.80 -1.0
965,672 + 13135 mRNA_4767 0.80 -3.0
965,785 - 13135 mRNA_4767 0.85 -0.5
965,799 - 13135 mRNA_4767 0.85 -2.9
965,800 - 13135 mRNA_4767 0.85 0.5
965,959 + 0.2
966,111 + -2.1
966,126 + -0.3
966,150 + 1.1
966,190 + -3.0
966,243 - -2.1
966,282 - -3.7
966,296 + -3.7
966,443 + -1.6
966,535 - -1.5
966,540 + 0.3
966,863 - 13136 mRNA_4768 0.13 -0.2
967,112 + 13136 mRNA_4768 0.22 -0.6
967,121 + 13136 mRNA_4768 0.22 -0.6
967,121 + 13136 mRNA_4768 0.22 -1.6