Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4757

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935432 to 936982 13124 mRNA_4757: 13125 - Hypothetical Protein, at 937399 to 937793 13125 mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938067 to 939280 13126

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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936,534 - 13124 mRNA_4756 0.71 -1.1
936,845 + -2.0
937,028 - 0.5
937,144 + -0.9
937,218 - -1.6
937,242 - -1.5
937,534 - 13125 mRNA_4757 0.34 -1.2
937,538 + 13125 mRNA_4757 0.35 -1.8
937,549 - 13125 mRNA_4757 0.38 -3.5
937,550 + 13125 mRNA_4757 0.38 -2.3
937,632 - 13125 mRNA_4757 0.59 -1.2
937,689 - 13125 mRNA_4757 0.73 -4.2
937,704 + 13125 mRNA_4757 0.77 -3.5
937,712 + 13125 mRNA_4757 0.79 -0.1
937,729 + 13125 mRNA_4757 0.84 -2.4
937,729 + 13125 mRNA_4757 0.84 -0.1
937,736 - 13125 mRNA_4757 0.85 -2.5
937,746 + 13125 mRNA_4757 0.88 -0.1
937,765 - 0.1
937,768 - -0.4
937,873 - -1.6
937,892 - -2.3
937,897 + -0.5
937,908 + -0.9
937,910 + 0.1
937,918 + -0.0
938,179 + -2.3
938,200 - 13126 mRNA_4758 0.11 0.0
938,207 + 13126 mRNA_4758 0.12 -0.9
938,297 - 13126 mRNA_4758 0.19 0.1
938,365 + 13126 mRNA_4758 0.25 -1.0
938,487 - 13126 mRNA_4758 0.35 -0.5
938,694 + 13126 mRNA_4758 0.52 -2.9