Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4749

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4748: 13116 - Hypothetical Protein, at 915599 to 917193 13116 mRNA_4749: 13117 - SUPERFAMILY--SSF52047, at 917502 to 919114 13117 mRNA_4750: 13118 - Hypothetical Protein, at 919411 to 921092 13118

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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916,516 - 13116 mRNA_4748 0.57 -1.8
916,672 + 13116 mRNA_4748 0.67 -0.5
916,674 + 13116 mRNA_4748 0.67 0.2
916,712 + 13116 mRNA_4748 0.70 -0.1
916,904 - 13116 mRNA_4748 0.82 -2.0
916,982 + 13116 mRNA_4748 0.87 -0.1
916,993 + 13116 mRNA_4748 0.87 -0.7
917,004 - 13116 mRNA_4748 0.88 0.5
917,053 + -2.9
917,057 + -2.0
917,091 - -0.6
917,373 - -0.7
917,534 - -3.6
917,551 + -0.8
917,563 + -1.7
917,675 - 13117 mRNA_4749 0.11 0.1
917,693 - 13117 mRNA_4749 0.12 -2.7
917,707 + 13117 mRNA_4749 0.13 -0.8
917,714 - 13117 mRNA_4749 0.13 -2.5
918,280 + 13117 mRNA_4749 0.48 -2.4
918,412 - 13117 mRNA_4749 0.56 -3.3
918,704 - 13117 mRNA_4749 0.75 -0.8
918,823 - 13117 mRNA_4749 0.82 -3.4
918,858 + 13117 mRNA_4749 0.84 -1.0
918,899 - 13117 mRNA_4749 0.87 -2.3
919,121 + -0.7
919,141 - -0.3
919,155 + -4.5
919,330 + -0.7
919,335 - -1.7
919,451 - 1.2
919,462 + -3.0
919,468 - -1.3
919,471 + -0.2
919,581 + 13118 mRNA_4750 0.10 -0.9
919,870 - 13118 mRNA_4750 0.27 -1.1
919,871 - 13118 mRNA_4750 0.27 1.2