Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4748

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4747: 13115 - SUPERFAMILY--SSF52047, at 913676 to 915300 13115 mRNA_4748: 13116 - Hypothetical Protein, at 915599 to 917193 13116 mRNA_4749: 13117 - SUPERFAMILY--SSF52047, at 917502 to 919114 13117

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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914,802 - 13115 mRNA_4747 0.69 -2.1
914,905 - 13115 mRNA_4747 0.76 -1.5
915,182 + -1.2
915,328 + -2.2
915,336 + -2.1
915,469 + 0.1
915,548 - -1.5
915,635 - -0.5
915,651 + 0.2
915,744 - -2.1
915,769 + 13116 mRNA_4748 0.11 -2.0
915,772 - 13116 mRNA_4748 0.11 -0.5
915,910 - 13116 mRNA_4748 0.19 -0.5
915,924 - 13116 mRNA_4748 0.20 -2.4
916,109 - 13116 mRNA_4748 0.32 -2.0
916,114 - 13116 mRNA_4748 0.32 -2.1
916,115 - 13116 mRNA_4748 0.32 -0.1
916,330 + 13116 mRNA_4748 0.46 -0.4
916,382 - 13116 mRNA_4748 0.49 -1.7
916,516 - 13116 mRNA_4748 0.57 -1.8
916,672 + 13116 mRNA_4748 0.67 -0.5
916,674 + 13116 mRNA_4748 0.67 0.2
916,712 + 13116 mRNA_4748 0.70 -0.1
916,904 - 13116 mRNA_4748 0.82 -2.0
916,982 + 13116 mRNA_4748 0.87 -0.1
916,993 + 13116 mRNA_4748 0.87 -0.7
917,004 - 13116 mRNA_4748 0.88 0.5
917,053 + -2.9
917,057 + -2.0
917,091 - -0.6
917,373 - -0.7
917,534 - -3.6
917,551 + -0.8
917,563 + -1.7
917,675 - 13117 mRNA_4749 0.11 0.1
917,693 - 13117 mRNA_4749 0.12 -2.7
917,707 + 13117 mRNA_4749 0.13 -0.8
917,714 - 13117 mRNA_4749 0.13 -2.5