Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4741

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4740: 13108 - Hypothetical Protein, at 896087 to 896524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109 mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901391 to 902457 13110

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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895,907 + -2.2
896,044 + -1.1
896,046 - -0.9
896,046 - -1.7
896,055 - -2.9
896,176 - 13108 mRNA_4740 0.20 -1.1
896,209 + 13108 mRNA_4740 0.28 -1.8
896,302 + 13108 mRNA_4740 0.49 -2.2
896,308 + 13108 mRNA_4740 0.50 -0.2
896,314 + 13108 mRNA_4740 0.52 -0.5
896,424 - 13108 mRNA_4740 0.77 0.0
896,447 + 13108 mRNA_4740 0.82 -0.9
896,455 + 13108 mRNA_4740 0.84 -2.5
896,456 - 13108 mRNA_4740 0.84 0.3
896,475 + 13108 mRNA_4740 0.89 -4.6
896,510 + -0.4
896,579 - -0.1
896,662 - -0.4
896,752 + -0.8
896,770 - 0.5
896,773 + -2.6
896,788 - -1.9
896,907 - -1.8
896,912 + -2.6
897,050 - 0.9
897,052 + -1.2
897,060 - -3.4
897,066 + -2.1
897,072 + -0.6
897,086 + -0.6
897,181 + -1.9
897,207 - -1.4
897,235 + 13109 mRNA_4741 0.10 -2.3
897,339 + 13109 mRNA_4741 0.13 -0.9
897,344 - 13109 mRNA_4741 0.13 -1.8
897,393 - 13109 mRNA_4741 0.14 -2.8
897,400 + 13109 mRNA_4741 0.14 -2.6
897,493 - 13109 mRNA_4741 0.16 -1.8
897,798 + 13109 mRNA_4741 0.23 -3.0
897,886 + 13109 mRNA_4741 0.25 -4.7
897,912 + 13109 mRNA_4741 0.26 -0.7
898,193 - 13109 mRNA_4741 0.33 -1.5
898,201 + 13109 mRNA_4741 0.33 -2.7
898,210 + 13109 mRNA_4741 0.33 -1.3
898,229 - 13109 mRNA_4741 0.33 -4.1
898,395 - 13109 mRNA_4741 0.37 -1.7
898,643 + 13109 mRNA_4741 0.43 -0.3
898,647 - 13109 mRNA_4741 0.43 -0.7
898,656 + 13109 mRNA_4741 0.43 -1.9
898,788 + 13109 mRNA_4741 0.46 -3.1
898,791 - 13109 mRNA_4741 0.46 0.7
898,795 - 13109 mRNA_4741 0.46 -0.2
899,096 + 13109 mRNA_4741 0.53 -4.3
899,353 - 13109 mRNA_4741 0.59 -0.4
899,465 + 13109 mRNA_4741 0.62 -0.9
899,647 - 13109 mRNA_4741 0.66 -0.9
899,736 - 13109 mRNA_4741 0.68 -2.0
899,784 + 13109 mRNA_4741 0.69 -0.5
899,827 - 13109 mRNA_4741 0.70 -3.1
899,859 + 13109 mRNA_4741 0.71 -1.2
899,989 - 13109 mRNA_4741 0.74 -1.6
900,048 - 13109 mRNA_4741 0.75 -0.8
900,428 + 13109 mRNA_4741 0.84 -4.1
900,595 - 13109 mRNA_4741 0.88 -2.0
900,670 + 13109 mRNA_4741 0.90 -1.4
900,834 - -1.4
900,885 - -3.1
900,892 + -1.7
900,967 - 0.4
901,042 + -0.1
901,180 + -2.2
901,282 - -4.0
901,357 + -3.2
901,862 - 13110 mRNA_4742 0.44 -2.4
901,928 + 13110 mRNA_4742 0.50 -2.4
901,930 - 13110 mRNA_4742 0.51 0.8