Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4733

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879432 to 880805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883185 to 884845 13102

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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880,467 - 13100 mRNA_4732 0.75 -4.1
880,817 - -1.9
881,044 - -1.9
881,045 + -1.7
881,048 + -0.9
881,086 - -1.5
881,159 - -0.7
881,164 - -1.6
881,171 - 0.7
881,184 + -1.1
881,185 + -1.1
881,225 + -0.9
881,243 + -4.1
881,257 - -0.2
881,293 - -3.5
881,428 + -0.8
881,506 - 13101 mRNA_4733 0.16 0.4
881,525 - 13101 mRNA_4733 0.18 -1.7
881,791 - 13101 mRNA_4733 0.46 -0.2
881,918 - 13101 mRNA_4733 0.60 -0.9
882,134 + 13101 mRNA_4733 0.84 -0.2
882,358 - -2.2
882,366 - -3.4
882,384 - 1.5
882,385 + -0.8
882,413 - -0.5
882,645 - -1.2
882,823 - -3.3
882,826 + 0.4
882,829 - -1.4
882,829 + -1.3
882,833 + -1.3
882,833 + -4.2
882,837 - -1.6
882,842 + 0.3
882,843 + -0.8
882,846 + -2.3
882,846 - -2.0
882,848 + -3.0
882,923 - -2.2
882,967 + -0.3
882,987 + -1.5
883,014 + -1.4
883,111 - 0.2
883,121 + -2.4
883,122 + -3.6
883,125 + -1.1
883,125 - -1.4
883,126 - -1.0
883,130 + -1.9