Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4722

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854 13090 mRNA_4723: 13091 - Hypothetical Protein, at 861099 to 862312 13091

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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857,781 + -0.9
858,337 + -1.1
858,513 - -2.0
858,848 + 13090 mRNA_4722 0.17 -1.4
858,979 - 13090 mRNA_4722 0.22 -2.3
858,990 + 13090 mRNA_4722 0.22 -2.1
859,010 - 13090 mRNA_4722 0.23 -1.9
859,140 - 13090 mRNA_4722 0.29 -2.7
859,592 + 13090 mRNA_4722 0.48 0.8
859,754 - 13090 mRNA_4722 0.54 -0.8
859,875 - 13090 mRNA_4722 0.59 -2.6
859,963 + 13090 mRNA_4722 0.63 -1.0
859,966 - 13090 mRNA_4722 0.63 -1.9
860,007 + 13090 mRNA_4722 0.65 -3.5
860,024 + 13090 mRNA_4722 0.65 -0.6
860,167 - 13090 mRNA_4722 0.71 -0.9
860,307 - 13090 mRNA_4722 0.77 -0.4
860,307 - 13090 mRNA_4722 0.77 -2.4
860,617 - -0.5
860,722 - -2.1
860,739 - -0.9
860,753 + -2.5
860,756 - -0.7
860,764 + -3.3
860,784 - -0.4
860,903 + -0.7
860,913 + -3.5
860,917 - 2.0
860,917 + -3.4
860,922 - -0.5
860,925 + -0.7
860,947 + -1.0
861,499 + 13091 mRNA_4723 0.33 -2.1