Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4721

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851220 to 854422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854 13090

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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853,825 + 13088 mRNA_4720 0.81 -1.8
853,869 - 13088 mRNA_4720 0.83 -1.5
854,104 + -1.8
854,122 + -3.0
854,250 + -2.4
854,365 + -1.7
854,407 - -0.1
854,410 + -0.5
854,415 - -1.1
854,420 + -3.6
854,528 + -0.7
854,587 - -1.7
854,589 - -0.5
854,593 - -2.2
854,610 + -4.8
854,664 + -0.8
854,743 + -0.4
854,753 - -0.5
854,756 + -2.7
854,884 - -2.6
856,535 + 13089 mRNA_4721 0.54 -0.3
857,781 + -0.9
858,337 + -1.1
858,513 - -2.0
858,848 + 13090 mRNA_4722 0.17 -1.4
858,979 - 13090 mRNA_4722 0.22 -2.3
858,990 + 13090 mRNA_4722 0.22 -2.1
859,010 - 13090 mRNA_4722 0.23 -1.9