Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4691

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4690: 13058 - HMMPfam-Heterokaryon incompatibility protein Het-C-PF07217, at 783339 to 787092 13058 mRNA_4691: 13059 - Hypothetical Protein, at 787368 to 788152 13059 mRNA_4692: 13060 - K00559 E2.1.1.41, SMT1, ERG6 sterol 24-C-methyltransferase, at 788429 to 789828 13060

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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786,530 - 13058 mRNA_4690 0.85 -1.3
786,824 + -2.2
786,942 - -0.3
786,963 + -2.0
786,971 - 0.4
786,979 - -3.0
786,983 + -0.4
786,996 - -0.3
786,996 - -2.2
787,129 - -2.9
787,132 + -1.2
787,136 - -2.8
787,137 - -0.6
787,149 - -1.6
787,154 + -0.8
787,160 + -0.5
787,175 - -1.1
787,267 - -1.1
787,274 - -1.7
787,274 - -2.2
787,277 + -3.3
787,279 + -1.4
787,282 - -1.0
787,300 - 1.1
787,300 - 1.1
787,328 + -2.3
787,337 - -2.9
787,463 + 13059 mRNA_4691 0.12 -0.7
787,586 + 13059 mRNA_4691 0.28 -1.9
787,603 + 13059 mRNA_4691 0.30 1.2
787,606 + 13059 mRNA_4691 0.30 -1.6
788,025 - 13059 mRNA_4691 0.84 -1.2
788,142 - -1.1
788,143 + -1.9
788,186 + -2.8
788,188 - -2.3
788,197 - -1.8
788,203 - -1.7
788,203 + -2.9
788,209 - -1.2
788,212 + -0.2
788,212 - -2.3
788,213 - -3.1
788,217 - -0.8
788,222 + -0.6
788,224 + -2.1