Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4687

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4686: 13054 - HMMPfam-COMPASS (Complex proteins associated with Set1p) component shg1-PF05205, at 771009 to 771893 13054 mRNA_4687: 13055 - BLAST Autophagy-related protein 11 [Termitomyces sp. J132], at 772309 to 775320 13055

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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771,381 + 13054 mRNA_4686 0.42 -0.8
771,847 - -1.3
772,092 - -0.9
772,099 - -2.1
772,104 + 0.0
772,258 + -0.7
772,275 + -0.7
772,281 + -2.0
772,418 - 0.3
772,421 - -1.9
772,526 - -0.0
773,032 + 13055 mRNA_4687 0.24 1.8
773,283 + 13055 mRNA_4687 0.32 -3.1
773,989 + 13055 mRNA_4687 0.56 0.4
774,654 - 13055 mRNA_4687 0.78 -1.7
774,660 + 13055 mRNA_4687 0.78 -0.6
775,034 + -0.4
775,542 - -2.1
775,663 + -0.7
775,746 - -1.9
775,884 - -1.3
776,222 + -1.2