Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4674

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743886 to 745346 13041 mRNA_4674: 13042 - K08150 SLC2A13, ITR MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13, at 745872 to 747839 13042 mRNA_4675: 13043 - SUPERFAMILY--SSF53448, at 748031 to 749259 13043

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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744,954 + 13041 mRNA_4673 0.73 -1.0
744,966 + 13041 mRNA_4673 0.74 -2.5
745,219 - -1.7
745,228 + -3.7
745,295 + -2.5
745,330 - -0.5
745,362 - -2.8
745,409 - -0.5
745,414 - -1.2
745,415 - -1.0
745,419 - -2.5
745,420 - -2.2
745,421 + -0.6
745,421 + -2.1
745,424 + -0.6
745,428 - -0.6
745,432 + -0.6
745,434 - -3.0
745,437 + -3.1
745,450 - -1.4
745,455 + -1.4
745,456 - -1.5
745,496 - -0.6
745,502 + -0.3
745,552 + 0.5
745,562 + -1.3
745,569 + -0.2
745,574 - -3.2
745,581 - 0.2
745,585 + -0.5
745,591 + -1.7
745,654 - 1.1
745,714 - 0.0
745,717 - -2.2
745,733 + -1.2
745,734 + -3.1
745,756 + -1.5
745,774 + -1.7
745,904 - -0.7
745,905 - -2.7
746,216 + 13042 mRNA_4674 0.17 -0.4
746,652 + 13042 mRNA_4674 0.40 -2.5
746,801 - 13042 mRNA_4674 0.47 -2.9
747,233 - 13042 mRNA_4674 0.69 -1.3
747,384 + 13042 mRNA_4674 0.77 -0.3
747,499 + 13042 mRNA_4674 0.83 -1.8
747,684 + -1.8
747,815 + 1.5
747,839 + -1.5