Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4673

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742031 to 743506 13040 mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743886 to 745346 13041 mRNA_4674: 13042 - K08150 SLC2A13, ITR MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13, at 745872 to 747839 13042

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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742,954 - 13040 mRNA_4672 0.63 -0.7
743,071 + 13040 mRNA_4672 0.70 -0.3
743,532 + -0.1
743,809 + -1.2
743,814 - -2.6
743,824 - -1.6
743,993 + 0.6
743,998 + -1.8
744,019 - -0.4
744,278 + 13041 mRNA_4673 0.27 -2.1
744,954 + 13041 mRNA_4673 0.73 -1.0
744,966 + 13041 mRNA_4673 0.74 -2.5
745,219 - -1.7
745,228 + -3.7
745,295 + -2.5
745,330 - -0.5
745,362 - -2.8
745,409 - -0.5
745,414 - -1.2
745,415 - -1.0
745,419 - -2.5
745,420 - -2.2
745,421 + -0.6
745,421 + -2.1
745,424 + -0.6
745,428 - -0.6
745,432 + -0.6
745,434 - -3.0
745,437 + -3.1
745,450 - -1.4
745,455 + -1.4
745,456 - -1.5
745,496 - -0.6
745,502 + -0.3
745,552 + 0.5
745,562 + -1.3
745,569 + -0.2
745,574 - -3.2
745,581 - 0.2
745,585 + -0.5
745,591 + -1.7
745,654 - 1.1
745,714 - 0.0
745,717 - -2.2
745,733 + -1.2
745,734 + -3.1
745,756 + -1.5
745,774 + -1.7
745,904 - -0.7
745,905 - -2.7
746,216 + 13042 mRNA_4674 0.17 -0.4