Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4637

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4636: 13004 - BLAST fungal specific transcription protein, putative [Rhiz..., at 660911 to 661323 13004 mRNA_4637: 13005 - Hypothetical Protein, at 661764 to 663098 13005 mRNA_4638: 13006 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839,SUPERFAMILY--SSF52266, at 663192 to 664874 13006

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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660,834 + -0.7
660,858 + -1.4
660,860 - -0.4
660,868 + -0.2
661,148 - 13004 mRNA_4636 0.57 -1.0
661,164 - 13004 mRNA_4636 0.61 -2.7
661,167 + 13004 mRNA_4636 0.62 -0.0
661,170 + 13004 mRNA_4636 0.63 -0.3
661,297 - -1.2
661,713 - 0.2
661,728 - -0.4
661,729 - -1.1
661,999 + 13005 mRNA_4637 0.18 -2.0
662,018 + 13005 mRNA_4637 0.19 -1.7
662,021 - 13005 mRNA_4637 0.19 -1.6
662,271 - 13005 mRNA_4637 0.38 -2.8
662,272 + 13005 mRNA_4637 0.38 -1.1
662,540 - 13005 mRNA_4637 0.58 -2.3
662,715 - 13005 mRNA_4637 0.71 0.4
662,731 - 13005 mRNA_4637 0.72 -0.9
662,924 + 13005 mRNA_4637 0.87 -1.9
663,169 + -0.9
663,519 - 13006 mRNA_4638 0.19 -1.6
663,745 + 13006 mRNA_4638 0.33 -1.0
663,787 + 13006 mRNA_4638 0.35 -0.4
664,058 + 13006 mRNA_4638 0.51 0.3