Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4621

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4620: 12988 - K05293 PIGU phosphatidylinositol glycan, class U, at 617665 to 619015 12988 mRNA_4621: 12989 - KOG0141 Isovaleryl-CoA dehydrogenase, at 619140 to 621311 12989 mRNA_4622: 12990 - K20168 TBC1D15 TBC1 domain family member 15, at 621636 to 624863 12990

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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619,035 - -0.8
619,036 - -1.9
619,053 - -3.9
619,068 - 0.3
619,072 + -0.6
619,078 + 1.6
619,209 - -1.4
619,230 + -1.8
619,785 + 12989 mRNA_4621 0.30 -2.1
619,948 + 12989 mRNA_4621 0.37 2.1
620,230 - 12989 mRNA_4621 0.50 0.3
620,382 + 12989 mRNA_4621 0.57 -2.3
621,290 + -0.2
621,563 - -1.3
621,564 + -4.1
621,578 + -2.4
621,602 + -1.0
621,877 + -1.9
621,884 - -2.9
621,897 - -2.6
621,898 - -0.3
621,902 - -1.2
621,907 + -1.2