Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4591

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4590: 12958 - Hypothetical Protein, at 537053 to 538336 12958 mRNA_4591: 12959 - KOG0379 Kelch repeat-containing proteins, at 538604 to 541004 12959 mRNA_4592: 12960 - K11655 BAZ1A, ACF1 bromodomain adjacent to zinc finger domain protein 1A, at 541515 to 545296 12960

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
537,789 - 12958 mRNA_4590 0.57 1.1
537,804 - 12958 mRNA_4590 0.58 -1.9
537,809 + 12958 mRNA_4590 0.59 1.1
537,817 + 12958 mRNA_4590 0.60 -2.0
537,933 - 12958 mRNA_4590 0.69 -3.8
538,220 - -1.1
538,531 + -1.6
538,661 + -1.6
538,666 + -0.2
538,682 - 1.5
538,821 + -1.8
539,127 + 12959 mRNA_4591 0.22 2.5
539,558 - 12959 mRNA_4591 0.40 -2.5
539,820 - 12959 mRNA_4591 0.51 -0.7
539,848 + 12959 mRNA_4591 0.52 -2.8
540,023 + 12959 mRNA_4591 0.59 -2.7
540,135 - 12959 mRNA_4591 0.64 -0.9
540,136 - 12959 mRNA_4591 0.64 -3.5
540,406 - 12959 mRNA_4591 0.75 0.8
540,593 - 12959 mRNA_4591 0.83 -0.4
540,609 + 12959 mRNA_4591 0.84 -1.3
540,707 - 12959 mRNA_4591 0.88 -1.0
540,881 - 0.4
541,009 - -1.1
541,017 + -0.8
541,029 + -1.0
541,171 - -0.6
541,174 - -1.8
541,175 - 0.0
541,186 - -2.3
541,194 - 0.1
541,198 - -3.2
541,200 + -1.4
541,312 + -0.3
541,317 + -2.5
541,377 + -2.1
541,386 - -0.7
541,394 - -1.4
541,544 + 0.1
541,548 + -1.0