Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4585

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4584: 12952 - KOG2217 U4/U6.U5 snRNP associated protein, at 522461 to 526317 12952 mRNA_4585: 12953 - SUPERFAMILY--SSF103473, at 526497 to 528503 12953 mRNA_4586: 12954 - K16075 MRS2, MFM1 magnesium transporter, at 528737 to 530080 12954

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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525,528 + 12952 mRNA_4584 0.80 0.6
525,820 + 12952 mRNA_4584 0.87 -0.9
525,974 + 0.0
526,107 + -1.3
526,114 + -1.5
526,115 + -1.9
526,250 - -1.8
526,264 + -1.0
526,388 - -1.4
526,395 + -2.1
526,411 + -0.2
526,421 + -1.1
526,524 + -0.8
526,715 + 12953 mRNA_4585 0.11 0.0
526,863 - 12953 mRNA_4585 0.18 -1.0
527,146 - 12953 mRNA_4585 0.32 -2.3
527,481 + 12953 mRNA_4585 0.49 -0.4
527,576 - 12953 mRNA_4585 0.54 -0.3
528,611 - -3.2
528,647 + -2.5
528,652 + -0.6
528,899 - 12954 mRNA_4586 0.12 -2.3
528,906 + 12954 mRNA_4586 0.13 -0.6
529,200 + 12954 mRNA_4586 0.34 0.2
529,335 + 12954 mRNA_4586 0.44 -3.3