Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4550

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4549: 12917 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 435952 to 437989 12917 mRNA_4550: 12918 - K16186 RRAGC_D Ras-related GTP-binding protein C/D, at 438083 to 440152 12918 mRNA_4551: 12919 - HMMPfam-Whi5 like-PF08528, at 440384 to 442291 12919

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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437,409 - 12917 mRNA_4549 0.71 -2.1
437,741 + 12917 mRNA_4549 0.88 -3.3
438,385 - 12918 mRNA_4550 0.15 -1.5
438,386 + 12918 mRNA_4550 0.15 2.3
438,387 - 12918 mRNA_4550 0.15 -3.6
438,398 + 12918 mRNA_4550 0.15 -0.6
438,425 + 12918 mRNA_4550 0.17 -1.8
439,153 + 12918 mRNA_4550 0.52 1.0
440,153 + -1.1
440,561 + -2.3
440,574 - 0.7
440,891 - 12919 mRNA_4551 0.27 -2.7