Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4534

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4533: 12901 - Hypothetical Protein, at 398174 to 399920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345 12902 mRNA_4535: 12903 - Hypothetical Protein, at 402768 to 403548 12903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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399,440 + 12901 mRNA_4533 0.72 -0.7
399,690 + 12901 mRNA_4533 0.87 0.7
399,849 + -0.6
399,852 + -3.1
399,996 + -2.9
400,010 - -2.3
400,033 - -0.6
400,173 + -0.5
400,783 + 12902 mRNA_4534 0.23 -2.2
401,170 - 12902 mRNA_4534 0.42 -0.8
401,343 - 12902 mRNA_4534 0.51 -2.2
401,611 + 12902 mRNA_4534 0.64 -1.8
401,734 - 12902 mRNA_4534 0.70 -2.6
402,083 - 12902 mRNA_4534 0.87 -3.3
402,088 + 12902 mRNA_4534 0.87 -0.3
402,185 - -1.7
402,216 + -0.5
402,337 - 0.4
402,379 - 0.2
402,484 + -1.7
402,487 - 0.9
402,490 + -1.7
402,497 - -0.7
402,506 - -3.1
402,509 - 1.3
402,511 - -1.8
402,517 + -1.7
402,517 + -2.5
402,518 - -0.7
402,519 + -0.5
402,524 - -0.1
402,527 - -3.7
402,529 + 0.7
402,529 + -2.0
402,530 + -1.1
402,530 + -2.5
402,573 - -1.1
402,578 + -2.0
402,602 - -2.5
402,602 + -2.2
402,604 - -1.7
402,609 + -0.3
402,612 + -1.7
402,613 + -0.7
402,629 + -2.6
402,654 + -3.6
402,663 - -0.4
402,665 - -0.8
402,678 - -3.0
402,679 - -1.2
402,679 - -0.5
402,690 + -2.3
402,693 + 0.9
402,706 - -0.5
402,738 - -2.2
402,753 - -2.7
402,877 - 12903 mRNA_4535 0.14 -0.8
403,015 - 12903 mRNA_4535 0.32 -0.1
403,334 + 12903 mRNA_4535 0.72 -3.0