Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4525

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4524: 12892 - Hypothetical Protein, at 379640 to 380547 12892 mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381008 to 382487 12893 mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382744 to 384550 12894

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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380,089 + 12892 mRNA_4524 0.49 1.3
380,187 + 12892 mRNA_4524 0.60 -1.8
380,633 - -0.5
380,733 + -0.4
381,808 - 12893 mRNA_4525 0.54 -1.7
381,812 + 12893 mRNA_4525 0.54 -0.8
382,086 + 12893 mRNA_4525 0.73 -0.1
382,112 + 12893 mRNA_4525 0.75 -2.3
382,142 - 12893 mRNA_4525 0.77 -0.9
382,244 - 12893 mRNA_4525 0.84 -1.9
382,259 + 12893 mRNA_4525 0.85 -1.3
382,285 - 12893 mRNA_4525 0.86 -0.3
382,291 - 12893 mRNA_4525 0.87 -3.1
382,291 - 12893 mRNA_4525 0.87 -1.1
382,298 + 12893 mRNA_4525 0.87 -3.2
382,400 + -1.3
382,405 + -1.0
382,518 - -2.0
382,676 - -1.8
382,684 + -1.3
382,807 - -2.3
382,828 - -3.0
382,934 + 12894 mRNA_4526 0.11 -1.4
382,979 + 12894 mRNA_4526 0.13 -1.4
383,104 + 12894 mRNA_4526 0.20 -3.6
383,233 - 12894 mRNA_4526 0.27 -1.4