Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4502

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4501: 12869 - Hypothetical Protein, at 330737 to 332545 12869 mRNA_4502: 12870 - KOG3720 Lysosomal & prostatic acid phosphatases, at 332888 to 334792 12870 mRNA_4503: 12871 - K12397 AP3B AP-3 complex subunit beta, at 335099 to 337846 12871

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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332,032 + 12869 mRNA_4501 0.72 -2.9
332,078 - 12869 mRNA_4501 0.74 -0.9
332,090 + 12869 mRNA_4501 0.75 -1.1
332,400 + -0.3
332,417 + -1.2
332,537 - -0.8
332,894 - -1.1
333,124 - 12870 mRNA_4502 0.12 -2.5
333,317 - 12870 mRNA_4502 0.23 -1.8
333,459 - 12870 mRNA_4502 0.30 -0.1
333,870 - 12870 mRNA_4502 0.52 -1.8
333,951 + 12870 mRNA_4502 0.56 -3.7
333,985 + 12870 mRNA_4502 0.58 -0.8
334,198 + 12870 mRNA_4502 0.69 -1.3
334,410 - 12870 mRNA_4502 0.80 -3.7
334,417 + 12870 mRNA_4502 0.80 -1.2
334,417 + 12870 mRNA_4502 0.80 -4.0
334,420 - 12870 mRNA_4502 0.80 1.0
334,423 - 12870 mRNA_4502 0.81 -2.9
334,424 + 12870 mRNA_4502 0.81 -0.6
334,441 + 12870 mRNA_4502 0.82 -1.4
334,541 - 12870 mRNA_4502 0.87 0.4
334,545 - 12870 mRNA_4502 0.87 -0.1
334,730 - -2.6
334,839 - -1.4
334,980 + 1.4
335,003 + -0.7
335,004 - -2.1
335,016 + -0.5
335,027 + 0.5
335,036 + -0.7
335,038 - -0.5
335,306 - -0.0
335,328 + -1.9
335,635 + 12871 mRNA_4503 0.20 -3.0