Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4496

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4495: 12863 - HMMPfam-TRAPP trafficking subunit Trs65-PF12735, at 313110 to 316762 12863 mRNA_4496: 12864 - SUPERFAMILY--SSF81383, at 317047 to 318791 12864

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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316,556 - -2.3
316,619 + -3.0
316,653 + 0.4
316,700 - -0.2
316,846 - 1.5
316,850 + 0.4
316,967 + -3.8
317,297 - 12864 mRNA_4496 0.14 -2.5
317,326 - 12864 mRNA_4496 0.16 -1.4
317,337 - 12864 mRNA_4496 0.17 -1.7
317,422 - 12864 mRNA_4496 0.21 -3.0
317,706 - 12864 mRNA_4496 0.38 -0.8
317,763 + 12864 mRNA_4496 0.41 -0.4
317,780 - 12864 mRNA_4496 0.42 -0.7
318,170 + 12864 mRNA_4496 0.64 0.2
318,733 + -1.9
319,032 + -0.9
319,162 + -2.2
319,207 - -0.1
319,323 + -1.4
319,535 + -0.8
319,751 + -1.2
319,773 + -1.2
319,775 - -2.2