Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4481

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4480: 12848 - Hypothetical Protein, at 283832 to 284551 12848 mRNA_4481: 12849 - Hypothetical Protein, at 284751 to 285386 12849 mRNA_4482: 12850 - K03144 TFIIH4, GTF2H4, TFB2 transcription initiation factor TFIIH subunit 4, at 285702 to 287837 12850

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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283,868 - -0.9
283,871 + -3.3
283,875 + 0.1
284,019 + 12848 mRNA_4480 0.26 -2.7
284,036 - 12848 mRNA_4480 0.28 -2.9
284,060 + 12848 mRNA_4480 0.32 -1.6
284,061 + 12848 mRNA_4480 0.32 -1.8
284,170 + 12848 mRNA_4480 0.47 -3.3
284,181 + 12848 mRNA_4480 0.48 -1.1
284,187 - 12848 mRNA_4480 0.49 -2.3
284,197 + 12848 mRNA_4480 0.51 1.0
284,208 - 12848 mRNA_4480 0.52 -1.0
284,215 - 12848 mRNA_4480 0.53 0.0
284,254 - 12848 mRNA_4480 0.59 -0.9
284,269 + 12848 mRNA_4480 0.61 -1.1
284,291 + 12848 mRNA_4480 0.64 -1.6
284,300 + 12848 mRNA_4480 0.65 -1.1
284,301 + 12848 mRNA_4480 0.65 -3.0
284,320 + 12848 mRNA_4480 0.68 -0.3
284,324 - 12848 mRNA_4480 0.68 -0.4
284,339 + 12848 mRNA_4480 0.70 -0.0
284,386 + 12848 mRNA_4480 0.77 -3.0
284,393 + 12848 mRNA_4480 0.78 -3.8
284,445 - 12848 mRNA_4480 0.85 -0.3
284,482 + -2.0
284,503 + -0.6
284,516 + -1.9
284,517 - -3.5
284,540 + -1.5
284,540 + 0.2
284,551 - -3.5
284,561 + -0.7
284,561 + -2.8
284,562 + -1.9
284,570 + -1.9
284,572 + -0.1
284,579 - -1.1
284,580 + -2.8
284,583 + -1.6
284,607 + -0.8
284,626 + -2.0
284,763 - -1.3
284,768 - -1.9
284,778 - -2.6
284,785 + -3.3
284,905 - 12849 mRNA_4481 0.24 -1.2
284,928 + 12849 mRNA_4481 0.28 -0.5
285,151 - 12849 mRNA_4481 0.63 -2.1
285,196 + 12849 mRNA_4481 0.70 0.8
285,210 - 12849 mRNA_4481 0.72 -1.5
285,244 + 12849 mRNA_4481 0.78 -1.0
285,633 - -1.0
285,648 + -0.5