Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4450

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210344 to 212336 12817 mRNA_4450: 12818 - Hypothetical Protein, at 212523 to 213518 12818 mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214508 to 216794 12819

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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211,898 - 12817 mRNA_4449 0.78 -1.4
211,916 - 12817 mRNA_4449 0.79 -1.2
212,084 + 12817 mRNA_4449 0.87 -2.1
212,153 + -0.8
212,172 - -1.3
212,277 - -0.3
212,780 - 12818 mRNA_4450 0.26 -3.4
213,203 + 12818 mRNA_4450 0.68 -1.6
213,206 + 12818 mRNA_4450 0.69 -1.4
213,216 - 12818 mRNA_4450 0.70 -0.1
213,505 + -1.5
213,516 - -3.2
213,612 + -1.8
213,641 + -1.4
213,647 + -5.4
213,649 + -1.3
213,680 + -0.3
213,778 + -0.4
213,781 - 1.2
213,794 - -1.2
213,806 + -1.5
213,810 - -0.7
213,813 - -0.5
213,813 + -2.3
213,937 - -2.5
213,944 + -2.6
213,961 + -0.2
213,969 + -0.7