Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4438

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4437: 12805 - KOG4629 Predicted mechanosensitive ion channel, at 179176 to 181994 12805 mRNA_4438: 12806 - Hypothetical Protein, at 182518 to 183149 12806 mRNA_4439: 12807 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 183343 to 183707 12807 mRNA_4440: 12808 - KOG2439 Nuclear architecture related protein, at 183991 to 186593 12808

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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181,660 - 12805 mRNA_4437 0.88 -3.5
182,260 + -3.4
182,277 + -1.6
182,427 - -1.2
182,439 - -0.0
182,459 + -1.4
182,492 + -2.8
182,519 + -0.8
182,534 + -0.5
182,594 + 12806 mRNA_4438 0.12 -0.8
182,610 + 12806 mRNA_4438 0.15 -2.2
182,754 + 12806 mRNA_4438 0.37 -1.3
182,770 - 12806 mRNA_4438 0.40 0.7
182,892 + 12806 mRNA_4438 0.59 -3.1
183,039 + 12806 mRNA_4438 0.82 -1.5
183,067 - 12806 mRNA_4438 0.87 -4.4
183,147 - 0.1
183,188 + -2.8
183,230 + -0.2
183,232 - -2.2
183,331 - -1.9
183,384 + 12807 mRNA_4439 0.11 -1.4
183,435 - 12807 mRNA_4439 0.25 -1.7
183,435 - 12807 mRNA_4439 0.25 -3.4
183,488 + 12807 mRNA_4439 0.40 -0.4
183,737 + -0.3
183,768 - -4.2
183,802 - -2.4
183,943 + -1.1
183,953 + -1.0