Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4434

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4433: 12801 - Hypothetical Protein, at 173129 to 173293 12801 mRNA_4434: 12802 - Hypothetical Protein, at 173959 to 175087 12802 mRNA_4435: 12803 - KOG0154 RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains, at 175416 to 177921 12803

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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173,001 + -1.1
173,006 - -1.2
173,007 + -1.4
173,044 + -0.5
173,216 - 12801 mRNA_4433 0.53 -2.3
173,483 - -1.2
173,513 - -0.6
173,641 - -1.6
173,749 + 0.5
173,901 - -0.5
173,906 - -3.0
174,054 + -1.5
174,057 + 0.1
174,081 - 12802 mRNA_4434 0.11 -1.5
174,117 + 12802 mRNA_4434 0.14 -2.2
174,220 - 12802 mRNA_4434 0.23 -2.0
174,228 + 12802 mRNA_4434 0.24 -0.7
174,355 - 12802 mRNA_4434 0.35 -2.7
174,362 + 12802 mRNA_4434 0.36 -1.4
174,368 + 12802 mRNA_4434 0.36 -0.6
174,411 + 12802 mRNA_4434 0.40 -1.7
174,412 + 12802 mRNA_4434 0.40 -1.3
174,703 + 12802 mRNA_4434 0.66 -2.1
174,773 - 12802 mRNA_4434 0.72 -0.5
174,907 - 12802 mRNA_4434 0.84 -1.8
174,915 + 12802 mRNA_4434 0.85 -1.0
174,941 - 12802 mRNA_4434 0.87 -2.0
174,947 + 12802 mRNA_4434 0.88 -1.5
175,090 + -3.0
175,090 - -0.3
175,218 + -3.8
175,223 + -2.6
175,390 + -0.4
175,485 + -0.4
175,544 - -2.4
175,554 + -3.1
175,667 - 12803 mRNA_4435 0.10 0.5
175,815 + 12803 mRNA_4435 0.16 -0.3
175,945 + 12803 mRNA_4435 0.21 -1.0