Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4413

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4412: 12780 - SUPERFAMILY--SSF52047, at 120442 to 126387 12780 mRNA_4413: 12781 - KOG0252 Inorganic phosphate transporter, at 126520 to 129077 12781 mRNA_4414: 12782 - BLAST DiGeorge syndrome critical region 6 (DGCR6) protein [..., at 129803 to 130566 12782

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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125,795 - -1.6
125,803 + -2.7
125,806 - -3.1
125,871 + -2.1
126,051 + -0.3
126,051 - -1.9
126,057 + -2.4
126,157 - -2.0
126,240 + -0.5
126,358 + -0.5
126,492 - 1.8
126,506 + -2.7
126,527 + -2.8
126,600 - -2.0
126,817 - 12781 mRNA_4413 0.12 0.3
126,880 + 12781 mRNA_4413 0.14 0.8
126,957 + 12781 mRNA_4413 0.17 0.7
127,029 + 12781 mRNA_4413 0.20 -1.3
127,209 + 12781 mRNA_4413 0.27 -1.3
127,275 + 12781 mRNA_4413 0.30 -2.5
127,525 + 12781 mRNA_4413 0.39 -2.2
127,770 + 12781 mRNA_4413 0.49 -1.0
127,799 + 12781 mRNA_4413 0.50 -1.2
127,841 - 12781 mRNA_4413 0.52 -2.1
127,846 - 12781 mRNA_4413 0.52 -3.3
127,853 - 12781 mRNA_4413 0.52 0.9
127,988 - 12781 mRNA_4413 0.57 -1.3
128,108 + 12781 mRNA_4413 0.62 0.2
128,220 - 12781 mRNA_4413 0.66 -0.2
128,460 + 12781 mRNA_4413 0.76 1.2
128,528 - 12781 mRNA_4413 0.78 -2.1
128,617 - 12781 mRNA_4413 0.82 -1.6
128,665 - 12781 mRNA_4413 0.84 -1.7
128,668 + 12781 mRNA_4413 0.84 -1.6
128,704 + 12781 mRNA_4413 0.85 -0.5
128,873 - -0.5
128,874 - -1.6
129,023 + -2.1
129,214 + -1.9
129,248 + -1.5
129,251 - -1.6
129,425 - -3.0
129,474 + 0.9
129,484 - 1.2
129,484 - -1.9
129,486 - -1.6
129,495 - -0.9
129,502 - -0.5
129,503 + -0.3
129,514 + 0.3
129,521 + -0.6
129,597 + -1.4
129,614 - -2.7
129,624 + -0.8
129,745 + -2.4
129,751 - -0.8
129,771 - -1.2
129,824 - -3.8
129,889 + 12782 mRNA_4414 0.11 -2.4
130,057 + 12782 mRNA_4414 0.33 -1.2