Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4383

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750 mRNA_4383: 12751 - Hypothetical Protein, at 63561 to 65177 12751 mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65499 to 68176 12752

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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62,785 - 12750 mRNA_4382 0.65 -1.1
62,792 + 12750 mRNA_4382 0.66 -3.5
63,062 + 12750 mRNA_4382 0.85 -1.2
63,066 - 12750 mRNA_4382 0.85 -2.5
63,067 + 12750 mRNA_4382 0.85 -0.1
63,071 - 12750 mRNA_4382 0.85 0.0
63,130 - 12750 mRNA_4382 0.89 -0.3
63,207 - -2.8
63,354 + -0.9
63,394 - -0.3
63,394 - -2.3
63,498 - -1.2
63,510 - -0.6
63,516 + -2.2
63,516 + 1.9
63,531 + -2.5
63,953 + 12751 mRNA_4383 0.24 -1.6
64,638 - 12751 mRNA_4383 0.67 -3.1
64,656 - 12751 mRNA_4383 0.68 -2.9
64,809 - 12751 mRNA_4383 0.77 -0.2
64,829 + 12751 mRNA_4383 0.78 -0.2
64,830 - 12751 mRNA_4383 0.78 -1.4
64,974 - 12751 mRNA_4383 0.87 -2.6
65,093 + -0.3
65,101 - -1.8
65,128 - -4.5
65,136 + -0.7
65,266 + 0.4
65,323 - -1.1
65,390 - 0.1
65,392 + -3.9
65,434 + -2.8
65,439 + -1.6
65,441 + -1.6
65,443 - -2.7
65,728 - -0.9
65,875 - 12752 mRNA_4384 0.14 -0.2
65,951 + 12752 mRNA_4384 0.17 -1.6
65,960 + 12752 mRNA_4384 0.17 -2.5
66,171 - 12752 mRNA_4384 0.25 -1.6