Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4350

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4349: 12717 - K02873 RP-L13e, RPL13 large subunit ribosomal protein L13e, at 1969971 to 1971273 12717 mRNA_4350: 12718 - K03635 MOCS2, moaE molybdopterin synthase catalytic subunit, at 1971596 to 1972460 12718

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,970,785 - 12717 mRNA_4349 0.62 -1.5
1,971,295 + -1.1
1,971,360 - -1.7
1,971,392 - -3.2
1,971,469 - -1.6
1,971,507 + 0.6
1,971,684 - 12718 mRNA_4350 0.10 -3.6
1,971,802 - 12718 mRNA_4350 0.24 -1.2
1,971,839 - 12718 mRNA_4350 0.28 -1.1
1,971,956 - 12718 mRNA_4350 0.42 0.0
1,971,962 + 12718 mRNA_4350 0.42 0.4
1,972,130 - 12718 mRNA_4350 0.62 2.3
1,972,217 - 12718 mRNA_4350 0.72 -1.5
1,972,248 + 12718 mRNA_4350 0.75 -0.9
1,972,281 - 12718 mRNA_4350 0.79 -1.4
1,972,329 - 12718 mRNA_4350 0.85 -1.0
1,972,335 - 12718 mRNA_4350 0.85 -2.0
1,972,336 - 12718 mRNA_4350 0.86 -0.5
1,972,433 - -0.9
1,972,512 + -1.3
1,972,522 + -2.4
1,972,529 + -3.2
1,972,532 + -1.1
1,972,532 + -3.1
1,972,532 - 0.8
1,972,543 + -1.0
1,972,570 - -3.1
1,972,630 + -1.2
1,972,636 + 0.1
1,972,642 + -0.0
1,972,643 - -0.4
1,972,659 - -1.7
1,972,675 - -1.5
1,972,676 - 0.7
1,972,677 - 0.1
1,972,690 - -2.4
1,972,691 - -1.1
1,972,695 - -1.8
1,972,699 + -1.0
1,972,704 - -0.8
1,972,713 + -2.3
1,972,722 - -1.1
1,972,722 - 0.2
1,972,750 - -2.5
1,972,770 + 0.0
1,972,816 - -1.8
1,972,835 - -1.2
1,972,842 - -1.3
1,972,853 - -1.4
1,972,858 + -2.7
1,972,868 - -2.0
1,972,886 - -0.9
1,972,890 - -3.0
1,972,890 - -0.7
1,972,891 - -0.3
1,972,892 - -0.3
1,972,893 - -1.9
1,972,893 - -1.8
1,972,901 - 0.2
1,972,907 - -1.6
1,972,912 - -3.4
1,972,912 - -2.9
1,972,914 - -1.4
1,972,923 - -0.7
1,972,926 - -0.4