Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4314

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4313: 12681 - Hypothetical Protein, at 1878884 to 1880623 12681 mRNA_4314: 12682 - Hypothetical Protein, at 1881006 to 1883368 12682 mRNA_4315: 12683 - Hypothetical Protein, at 1883534 to 1885607 12683

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,880,040 - 12681 mRNA_4313 0.66 -2.0
1,880,166 - 12681 mRNA_4313 0.74 -3.0
1,880,179 + 12681 mRNA_4313 0.74 -0.5
1,880,365 - 12681 mRNA_4313 0.85 -0.2
1,880,574 - -1.6
1,880,630 - -0.9
1,880,767 + -1.0
1,880,914 - -1.7
1,880,926 + -0.7
1,881,244 + 12682 mRNA_4314 0.10 -1.2
1,881,396 + 12682 mRNA_4314 0.17 -1.1
1,881,632 - 12682 mRNA_4314 0.26 -2.4
1,882,615 - 12682 mRNA_4314 0.68 -1.3
1,882,749 - 12682 mRNA_4314 0.74 -1.4
1,882,794 + 12682 mRNA_4314 0.76 -2.5
1,882,807 + 12682 mRNA_4314 0.76 -2.2
1,882,856 + 12682 mRNA_4314 0.78 -2.2
1,882,960 - 12682 mRNA_4314 0.83 0.6
1,883,106 - 12682 mRNA_4314 0.89 -0.3
1,883,214 - -0.5
1,883,247 + -3.3
1,883,400 + -1.3
1,883,404 - -1.1
1,883,553 - -0.7
1,883,766 - 12683 mRNA_4315 0.11 -1.0
1,883,791 - 12683 mRNA_4315 0.12 -3.4
1,883,827 + 12683 mRNA_4315 0.14 -0.6
1,884,099 + 12683 mRNA_4315 0.27 -3.3
1,884,114 + 12683 mRNA_4315 0.28 -3.2