Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4304

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4303: 12671 - K14005 SEC31 protein transport protein SEC31, at 1846529 to 1852379 12671 mRNA_4304: 12672 - Hypothetical Protein, at 1853168 to 1855421 12672

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,852,434 - -3.6
1,852,441 - -1.3
1,852,443 + -0.9
1,852,445 - -0.8
1,852,447 - -3.1
1,852,447 - -2.2
1,852,452 - -2.8
1,852,460 + -1.4
1,852,461 - -2.5
1,852,465 + 0.1
1,852,472 + -2.9
1,852,473 + -0.8
1,852,607 + -1.7
1,852,611 - -0.4
1,852,614 + -0.9
1,852,624 - -1.8
1,852,640 + -0.6
1,852,652 - -1.3
1,852,667 + -3.4
1,852,730 - -1.6
1,852,745 + -0.8
1,852,748 + -0.6
1,852,751 + -1.7
1,852,758 - -0.7
1,852,777 - 1.1
1,852,786 - -3.2
1,852,791 + -0.5
1,852,803 + -0.8
1,852,804 - -0.4
1,852,805 + -4.0
1,852,869 + -2.9
1,852,896 - 0.0
1,852,924 + -2.9
1,852,926 - -0.7
1,852,930 - -3.0
1,852,931 - -0.7
1,852,936 - -3.1
1,852,937 - -2.5
1,852,945 - -0.5
1,852,955 + -0.8
1,852,970 + -0.9
1,852,971 + -1.3
1,852,977 + -1.4
1,852,979 + 0.5
1,852,994 - -0.5
1,853,012 + -0.7
1,853,033 - -1.1
1,853,036 + -0.3
1,853,054 - -2.2
1,853,073 + -0.3
1,853,080 + -1.8
1,853,082 + -2.4
1,853,083 + -2.8
1,853,085 - -1.6
1,853,085 + -1.7
1,853,089 - -0.6
1,853,091 + -0.8
1,853,093 - -1.5
1,853,361 - -1.2
1,853,369 - -0.8
1,853,377 - -0.6
1,853,388 + -1.5
1,853,540 - 12672 mRNA_4304 0.17 -0.9
1,853,964 + 12672 mRNA_4304 0.35 -2.6
1,854,650 - 12672 mRNA_4304 0.66 0.4
1,854,659 + 12672 mRNA_4304 0.66 -1.9
1,854,815 - 12672 mRNA_4304 0.73 0.6
1,854,999 + 12672 mRNA_4304 0.81 -0.5
1,855,065 + 12672 mRNA_4304 0.84 0.9
1,855,876 + -3.4
1,855,965 - -0.9
1,856,387 + -1.6