Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4296

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4296: 12664 - Hypothetical Protein, at 1828466 to 1828997 12664 mRNA_4297: 12665 - K01166 E3.1.27.1 ribonuclease T2, at 1829506 to 1831349 12665

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,827,516 + -3.1
1,827,612 - -2.4
1,827,739 + -2.2
1,827,796 + -1.0
1,827,921 - 0.4
1,827,930 + -0.4
1,828,066 - 0.5
1,828,313 - 0.5
1,828,390 - -0.4
1,828,410 + -0.1
1,828,499 + -1.1
1,828,511 - -1.3
1,828,673 + 12664 mRNA_4296 0.39 -1.0
1,828,680 + 12664 mRNA_4296 0.40 -2.7
1,828,690 - 12664 mRNA_4296 0.42 -1.7
1,828,696 - 12664 mRNA_4296 0.43 -0.6
1,828,701 + 12664 mRNA_4296 0.44 -3.8
1,828,711 + 12664 mRNA_4296 0.46 -4.0
1,828,842 + 12664 mRNA_4296 0.71 -0.9
1,828,975 + -0.7
1,829,000 - 0.1
1,829,105 - -2.5
1,829,108 + -1.3
1,829,109 - -2.6
1,829,110 + 0.4
1,829,115 + 0.2
1,829,138 - -0.2
1,829,150 + -2.5
1,829,154 + -2.5
1,829,159 - 0.4
1,829,159 + -0.0
1,829,163 + -0.7
1,829,180 - -0.8
1,829,197 - -1.3
1,829,211 - 0.9
1,829,212 - -0.8
1,829,224 - -2.3
1,829,240 - -2.3
1,829,241 + -1.1
1,829,251 - -1.9
1,829,259 - -4.6
1,829,261 + -2.6
1,829,267 + 0.2
1,829,323 + 1.7
1,829,327 + -3.3
1,829,328 + -2.0
1,829,333 - 0.4
1,829,359 + -1.3
1,829,404 - -1.0
1,829,415 - -1.4
1,829,423 - -0.0
1,829,434 + -3.2
1,829,516 + 0.3
1,829,557 + -0.8
1,829,685 - 0.6
1,829,711 - 12665 mRNA_4297 0.11 -2.1
1,829,844 - 12665 mRNA_4297 0.18 -1.2
1,829,997 - 12665 mRNA_4297 0.27 -2.1