Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4284

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4283: 12651 - KOG2383 Predicted ATPase, at 1797865 to 1800888 12651 mRNA_4284: 12652 - KOG2806 Chitinase, at 1801203 to 1803513 12652 mRNA_4285: 12653 - K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5, at 1803577 to 1805345 12653

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,800,377 + 12651 mRNA_4283 0.83 0.5
1,800,527 + 12651 mRNA_4283 0.88 -1.6
1,800,565 + 12651 mRNA_4283 0.89 -2.9
1,800,583 - 12651 mRNA_4283 0.90 -0.5
1,800,843 - -3.3
1,800,852 + -1.2
1,800,864 + -0.9
1,800,878 + -1.0
1,801,028 - -2.0
1,801,034 + -2.3
1,801,294 + -2.8
1,801,406 - -2.5
1,801,518 + 12652 mRNA_4284 0.14 -0.5
1,801,895 + 12652 mRNA_4284 0.30 -1.7
1,801,937 - 12652 mRNA_4284 0.32 -0.9
1,802,001 - 12652 mRNA_4284 0.35 0.6
1,802,298 + 12652 mRNA_4284 0.47 -1.1
1,802,491 - 12652 mRNA_4284 0.56 -1.2
1,802,762 + 12652 mRNA_4284 0.67 -1.4
1,803,218 - 12652 mRNA_4284 0.87 -1.6
1,803,340 - -1.6
1,803,473 + -2.9
1,803,482 + -0.1
1,803,507 + -2.6