Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4282

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4281: 12649 - K11778 DHDDS, RER2, SRT1 ditrans,polycis-polyprenyl diphosphate synthase, at 1794791 to 1795923 12649 mRNA_4282: 12650 - Hypothetical Protein, at 1796863 to 1797558 12650 mRNA_4283: 12651 - KOG2383 Predicted ATPase, at 1797865 to 1800888 12651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,795,993 + -2.4
1,796,155 - -3.7
1,796,171 + -3.0
1,796,191 - -2.0
1,796,210 - -0.9
1,796,781 - -0.9
1,796,879 + -1.1
1,797,060 + 12650 mRNA_4282 0.28 -0.0
1,797,216 + 12650 mRNA_4282 0.51 -0.4
1,797,336 + 12650 mRNA_4282 0.68 -0.9
1,797,413 - 12650 mRNA_4282 0.79 -1.0
1,797,761 - -2.0
1,797,781 - -0.2
1,797,785 + -1.8
1,797,795 - 0.2
1,797,801 - -1.9
1,797,802 + -2.7
1,797,946 - -2.2
1,797,948 - -0.6
1,797,950 - -1.8