Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4269

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4268: 12636 - K02921 RP-L37Ae, RPL37A large subunit ribosomal protein L37Ae, at 1752786 to 1753388 12636 mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1754378 to 1755256 12637

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,753,829 + -2.5
1,753,840 + -0.8
1,754,102 + -0.4
1,754,109 + -0.9
1,754,121 + -0.8
1,754,233 + -1.3
1,754,240 - -0.9
1,754,245 - -1.4
1,754,245 + -2.9
1,754,247 - -1.6
1,754,250 + -0.3
1,754,385 + -0.1
1,754,400 + -3.2
1,754,678 - 12637 mRNA_4269 0.34 -0.4
1,754,711 + 12637 mRNA_4269 0.38 -1.3
1,754,822 - 12637 mRNA_4269 0.51 -1.3
1,755,205 - 2.3
1,755,272 + -1.8
1,755,672 - -0.3
1,755,989 - -1.5
1,756,238 - -1.3