Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4266

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4265: 12633 - BLAST lytic polysaccharide monooxygenase [Cenococcum geophi..., at 1746192 to 1748005 12633 mRNA_4266: 12634 - BLAST sucrase/ferredoxin-like domain-containing protein [Rh..., at 1748531 to 1749378 12634 mRNA_4267: 12635 - K01581 E4.1.1.17, ODC1, speC, speF ornithine decarboxylase, at 1750251 to 1751902 12635

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1,747,695 - 12633 mRNA_4265 0.83 -2.0
1,747,697 - 12633 mRNA_4265 0.83 -0.5
1,748,152 - -2.6
1,748,193 + -0.9
1,748,211 - 1.3
1,748,211 - 1.1
1,748,343 - -2.9
1,748,365 + -0.4
1,748,468 - -2.3
1,748,471 + -1.4
1,748,476 + -2.0
1,748,480 + -1.5
1,748,480 + -0.9
1,748,484 - -3.1
1,748,486 + 1.1
1,748,487 + -0.7
1,748,490 + -1.5
1,748,495 + 0.8
1,748,501 + -1.4
1,748,533 + -0.7
1,748,637 + 12634 mRNA_4266 0.12 -1.6
1,748,677 - 12634 mRNA_4266 0.17 -1.0
1,748,776 - 12634 mRNA_4266 0.29 -1.9
1,748,801 + 12634 mRNA_4266 0.32 -2.6
1,748,801 + 12634 mRNA_4266 0.32 -2.0
1,748,817 + 12634 mRNA_4266 0.34 -0.4
1,749,054 - 12634 mRNA_4266 0.62 -0.5
1,749,251 - 12634 mRNA_4266 0.85 -1.4
1,749,374 - -2.3
1,749,393 - -0.5
1,749,399 + -1.8
1,749,667 + -2.2
1,749,687 + -0.5
1,749,981 + -2.9
1,750,139 + -0.9