Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4166

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4165: 12533 - Hypothetical Protein, at 1513991 to 1515479 12533 mRNA_4166: 12534 - K12597 AIR1_2 protein AIR1/2, at 1515878 to 1517607 12534 mRNA_4167: 12535 - Hypothetical Protein, at 1518124 to 1518875 12535

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,515,006 - 12533 mRNA_4165 0.68 -0.5
1,515,020 + 12533 mRNA_4165 0.69 -1.5
1,515,030 - 12533 mRNA_4165 0.70 -1.1
1,515,274 - 12533 mRNA_4165 0.86 -2.5
1,515,310 + 12533 mRNA_4165 0.89 -1.1
1,515,318 + 12533 mRNA_4165 0.89 1.4
1,515,321 + 12533 mRNA_4165 0.89 1.1
1,515,332 + 0.4
1,515,464 - -1.1
1,515,467 + -0.7
1,515,481 + -0.7
1,515,485 + -2.4
1,515,604 - -2.0
1,515,612 - -1.1
1,515,622 + 0.2
1,515,631 + -2.1
1,515,634 + -0.9
1,515,641 - -1.1
1,515,734 - -0.6
1,515,738 - -0.1
1,515,748 + -1.6
1,515,756 - -0.6
1,515,758 + -0.6
1,515,879 - -1.3
1,515,897 - -0.4
1,515,910 - -0.6
1,515,912 + -2.6
1,515,925 + -1.4
1,515,925 + -2.3
1,515,925 + -0.1
1,516,060 + 12534 mRNA_4166 0.11 -0.0
1,516,063 + 12534 mRNA_4166 0.11 -0.6
1,516,090 + 12534 mRNA_4166 0.12 -0.3
1,516,540 - 12534 mRNA_4166 0.38 -0.0
1,516,653 + 12534 mRNA_4166 0.45 0.2
1,516,666 + 12534 mRNA_4166 0.46 -2.5
1,517,013 - 12534 mRNA_4166 0.66 -2.3
1,517,075 + 12534 mRNA_4166 0.69 -3.3
1,517,371 - 12534 mRNA_4166 0.86 -1.4
1,517,653 + -0.2
1,517,967 + -1.4
1,517,988 + -1.7
1,518,080 - -1.5
1,518,087 - -0.7
1,518,090 - -1.8
1,518,098 + -2.4
1,518,099 + -0.4
1,518,105 + -0.2
1,518,107 + -0.1
1,518,236 - 12535 mRNA_4167 0.15 -3.7
1,518,237 + 12535 mRNA_4167 0.15 -0.5
1,518,251 - 12535 mRNA_4167 0.17 -0.6
1,518,253 + 12535 mRNA_4167 0.17 0.6
1,518,254 + 12535 mRNA_4167 0.17 -1.4
1,518,257 - 12535 mRNA_4167 0.18 -1.2
1,518,258 + 12535 mRNA_4167 0.18 -1.3
1,518,406 - 12535 mRNA_4167 0.38 -0.8
1,518,424 - 12535 mRNA_4167 0.40 -1.7
1,518,558 - 12535 mRNA_4167 0.58 0.0