Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4164

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4163: 12531 - Hypothetical Protein, at 1509343 to 1510830 12531 mRNA_4164: 12532 - K02021 ABC.MR putative ABC transport system ATP-binding protein, at 1511500 to 1513697 12532 mRNA_4165: 12533 - Hypothetical Protein, at 1513991 to 1515479 12533

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,510,556 - 12531 mRNA_4163 0.82 -1.8
1,510,715 - -1.6
1,510,837 + -0.6
1,510,873 - -1.5
1,510,970 - -0.6
1,510,988 + -0.1
1,510,999 - -1.8
1,511,008 + -1.7
1,511,011 - -0.6
1,511,020 - -1.4
1,511,020 - -0.4
1,511,046 + -0.3
1,511,138 + -1.2
1,511,143 - -1.8
1,511,162 + 0.1
1,511,299 + -1.5
1,511,320 + -0.1
1,511,457 + -3.3
1,511,472 + -0.3
1,511,477 - -0.1
1,511,480 - -1.0
1,511,486 + -3.0
1,511,590 - -0.9
1,511,602 - -2.9
1,511,619 + 0.2
1,511,772 - 12532 mRNA_4164 0.12 -1.7
1,511,794 + 12532 mRNA_4164 0.13 -0.0
1,512,225 + 12532 mRNA_4164 0.33 -2.1
1,512,347 - 12532 mRNA_4164 0.39 -0.0
1,512,347 - 12532 mRNA_4164 0.39 -0.9
1,512,473 - 12532 mRNA_4164 0.44 -1.6
1,512,675 + 12532 mRNA_4164 0.53 0.9
1,512,803 + 12532 mRNA_4164 0.59 -2.9
1,513,068 - 12532 mRNA_4164 0.71 -2.4
1,513,387 + 12532 mRNA_4164 0.86 -1.6
1,513,461 - 12532 mRNA_4164 0.89 -1.9
1,513,816 - -1.2
1,513,844 - -1.8
1,513,844 + -0.9
1,514,000 + -0.3
1,514,165 + 12533 mRNA_4165 0.12 -0.3
1,514,292 + 12533 mRNA_4165 0.20 -1.5
1,514,343 + 12533 mRNA_4165 0.24 -0.0
1,514,594 + 12533 mRNA_4165 0.40 -1.9